Bansal Lab

@vibansal

Software tools and programs from the Bansal Lab at the University of California, San Diego

UC San Diego La Jolla, CA

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Language Breakdown

Lines of code distribution across 10 owned repositories

5.6M Total LOC

4,477,662 lines

79.5%

N/A

Python

590,973 lines

10.5%

N/A

Perl

327,260 lines

5.8%

N/A

Roff

105,408 lines

1.9%

N/A

C++

42,243 lines

0.7%

N/A

Other

89,357 lines

1.6%

N/A

I-Shaped Developer

I-shaped

Specialist — deep expertise in C

Python

Perl

Roff

C++

Collaboration Network

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+18%

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Coding Streak

Contribution activity over the past year

1 day

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Followers 39

Connor Duffy

@cvduffy

dracoloveforall-crypto

@dracoloveforall-crypto

xavierf38700

@xavierf38700

Sounkou Mahamane Toure

@sounkou-bioinfo

Taghrid Aloraini

@Taghrid-M

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Top Repositories

HapCUT2

software tools for haplotype assembly from sequence data

233 39

ancestry

program to estimate admixture coefficients from individual genotype or sequence data

33 17

hapcut

program for haplotype phasing from sequence reads and related tools

25 10

crisp

Code for multi-sample variant calling from sequence data of pooled or unpooled DNA samples

20 10

PCRduplicates

method to estimate PCR duplication rate from high-throughput sequencing data

MED263: bioinformatics lecture (2017, 2018, 2022, 2023)

get bibtex for pubmed articles

0 0

Python

spoa_python

python wrapper for SIMD partial order alignment library

0 0

C++

Open Source Impact

Contributions to external projects

2 merged PRs

vibansal-lab/edgecopy

tprodanov/agvc-paper

Contributed to 2 repositories